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Publications

Panpipes: a pipeline for multiomic single-cell data analysis

Rich-Griffin C. et al, (2023)

hadge: a comprehensive pipeline for donor deconvolution in single cell

Curion F. et al, (2023)

Constructing custom-made radiotranscriptomic signatures of vascular inflammation from routine CT angiograms: a prospective outcomes validation study in COVID-19

Kotanidis CP. et al, (2022), The Lancet Digital Health, 4, e705 - e716

Biochemical and metabolic maladaption defines pathological niches in progressive multiple sclerosis

Grant-Peters M. et al, (2022)

Identification of early neurodegenerative pathways in progressive multiple sclerosis

Kaufmann M. et al, (2022), Nature Neuroscience

Photizo: an open-source library for cross-sample analysis of FTIR spectroscopy data.

Grant-Peters M. et al, (2022), Bioinformatics (Oxford, England)

A blood atlas of COVID-19 defines hallmarks of disease severity and specificity

Ahern DJ. et al, (2022), Cell, 185, 916 - 938.e58

Photizo: an open-source library for cross-sample analysis of FTIR spectroscopy data

Grant-Peters M. et al, (2022)

An immunodominant NP105–113-B*07:02 cytotoxic T cell response controls viral replication and is associated with less severe COVID-19 disease

Peng Y. et al, (2022), Nature Immunology, 23, 50 - 61

No strong HLA association with MOG antibody disease in the UK population.

Grant-Peters M. et al, (2021), Annals of clinical and translational neurology, 8, 1502 - 1507

A blood atlas of COVID-19 defines hallmarks of disease severity and specificity

Ahern DJ. et al, (2021)

A novel neurodegenerative spectrum disorder in patients with MLKL deficiency.

Faergeman SL. et al, (2020), Cell death & disease, 11

Identifying cross-disease components of genetic risk across hospital data in the UK Biobank.

Cortes A. et al, (2020), Nature genetics, 52, 126 - 134

An integrated platform to systematically identify causal variants and genes for polygenic human traits

Downes DJ. et al, (2019)

Analysis of liver infiltrating lymphocytes in primary sclerosing cholangitis by surface antigen and single cell RNA sequencing using fine needle aspiration of the liver

Lynch K. et al, (2019), JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY, 34, 46 - 47

Pregnancy Immunogenetics and Genomics: Implications for Pregnancy-Related Complications and Autoimmune Disease.

Yeung H-Y. and Dendrou CA., (2019), Annual review of genomics and human genetics, 20, 73 - 97

ANALYSIS OF LIVER INFILTRATING LYMPHOCYTES IN PRIMARY SCLEROSING CHOLANGITIS BY SURFACE ANTIGEN AND SINGLE CELL RNASEQ

Lynch KD. et al, (2019), GASTROENTEROLOGY, 156, S1212 - S1212

Analysis of liver infiltrating lymphocytes in primary sclerosing cholangitis by surface antigen and single cell RNAseq

Lynch K. et al, (2019), JOURNAL OF HEPATOLOGY, 70, E78 - E79

Systematic classification of shared components of genetic risk for common human diseases

Cortes A. et al, (2018)

HLA variation and disease

Dendrou CA. et al, (2018), Nature Reviews Immunology, 18, 325 - 339

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