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Publications

Targeted metagenomics reveals association between severity and pathogen co-detection in infants with respiratory syncytial virus

Lin G-L. et al, (2024), Nature Communications, 15

Validation of an HIV whole genome sequencing method for HIV drug resistance testing in an Australian clinical microbiology laboratory

Jenkins F. et al, (2023), Journal of Medical Virology, 95

A large-scale, multi-centre, prospective observational study to treat hepatitis C in Pakistan and assess resistance to antiviral drugs (HepFREEPak): study protocol

Arif A. et al, (2023)

Genotyping and population characteristics of the China Kadoorie Biobank

Walters RG. et al, (2023), Cell Genomics, 3, 100361 - 100361

Inference of host-pathogen interaction matrices from genome-wide polymorphism data

Märkle H. et al, (2023)

Validation of a HIV Whole Genome Sequencing Method for HIV Drug Resistance Testing in an Australian Clinical Microbiology Laboratory

Jenkins F. et al, (2023)

An enrichment protocol and analysis pipeline for long read sequencing of the hepatitis B virus transcriptome

Ng E. et al, (2023), Journal of General Virology, 104

The impact of pre-existing cross-reactive immunity on SARS-CoV-2 infection and vaccine responses

Murray SM. et al, (2023), Nature Reviews Immunology, 23, 304 - 316

Pan-genotypic probe-based enrichment to improve efficiency of Hepatitis B virus sequencing

Lumley SF. et al, (2023)

Association between disease severity and co-detection of respiratory pathogens in infants with RSV infection

Lin G-L. et al, (2023)

A systematic review of Hepatitis B virus (HBV) prevalence and genotypes in Kenya: Data to inform clinical care and health policy

Downs LO. et al, (2023), PLOS Global Public Health, 3, e0001165 - e0001165

Utility of a buccal swab point-of-care test for the IFNL4 genotype in the era of direct acting antivirals for hepatitis C virus

Sy A. et al, (2023), PLOS ONE, 18, e0280551 - e0280551

Efficacy of ultra-short, response-guided sofosbuvir and daclatasvir therapy for hepatitis C in a single-arm mechanistic pilot study

Flower B. et al, (2023), eLife, 12

A calculated risk: Evaluating HIV resistance to the broadly neutralising antibodies10-1074 and 3BNC117

Zacharopoulou P. et al, (2022), Current Opinion in HIV and AIDS, 17, 352 - 358

Constructing custom-made radiotranscriptomic signatures of vascular inflammation from routine CT angiograms: a prospective outcomes validation study in COVID-19

Kotanidis CP. et al, (2022), The Lancet Digital Health, 4, e705 - e716

Genetic variation in TERT modifies the risk of hepatocellular carcinoma in alcohol-related cirrhosis: results from a genome-wide case-control study

Buch S. et al, (2022), Gut

Evolution of long-term vaccine induced and hybrid immunity in healthcare workers after different COVID-19 vaccination regimens: a longitudinal observational cohort study

Moore SC. et al, (2022)

Defining the key intrahepatic gene networks in HCV infection driven by sex

Marchi E. et al, (2022), Gut

Genotyping and population structure of the China Kadoorie Biobank

Walters RG. et al, (2022)

A systematic review of Hepatitis B virus (HBV) prevalence and genotypes in Kenya: Data to inform clinical care and health policy

Downs LO. et al, (2022)

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