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Si Quang LE

1. Le S.Q, Dang C.C, and Gascuel O. (2012), Modeling Protein Evolution with Several Amino Acid Replacement Matrices Depending on Site Rates, Molecular Biology and Evolution

2. Dall'Armellina E., Piechnik S., Ferreira V., Le S.Q., Robson M., Francis J., Cuculi F., Kharbanda R., Banning A., Choudhury, R., Karamitsos T., and Neubauer S. (2012) Cardiovascular magnetic resonance by non contrast T1 mapping allows assessment of severity of injury in acute myocardial infarction Journal of Cardiovascular Magnetic Resonance 14(1)15

3. Dang C.C, Lefort V., Le S.V., Le S.Q., Gascuel O. (2011), ReplacementMatrix: a Web Server for Maximum Likelihood Estimation of Amino Acid Replacement Rate Matrices, Bioinformatics doi: 10.1093/bioinformatics/btr435

4. Le S.Q and Richard Durbin (2011), SNP detection and genotyping from low-coverage sequencing data on multiple diploid samples, Genome Res. 21: 952-960

5. 1000 Genomes consortium (2010), A comprehensive map of common human genetic variation from population-scale sequencing, Nature 467, 1061-1073.

6. Dang C.C., Le S.Q, Gascuel O, and Le S.V (2010), FLU, an amino acid substitution model for influenza proteins, BMC Evolutionary Biology , 10:99

7. Le S.Q. and Gascuel O (2009), Accounting for Accessibility to Solvent and Secondary Structure in Protein Phylogenetics is Clearly Beneficial, Systematic Biology, Vol 5, 277-287.

8. Le S.Q, Gascuel O. and Lartillot N. (2008), Empirical profile mixture models for phylogenetic reconstruction, Bioinformatics , 24(20):2317-2323.

9. Le S.Q, Lartillot N. Gascuel O. (2008) Phylogenetic Mixture Models for Proteins, Philosophical Transactions of the Royal Society B , Vol. 363 (1512), 3965-3976.

10. Le S.Q. and Gascuel O (2008). An Improved General Amino Acid Replacement Matrix. Molecular Biology and Evolution 25(7):1307-1320.

11. Ho, T.B., Nguyen, C.H., Kawasaki, S., Le, S.Q., Takabayashi, K. (2007). Temporal Relations Extraction in Mining Hepatitis Data, New Generation Computing, Vol. 25, No. 3, 247-262.

12. Takabayashi, T., Ho, T.B., Yokoi, H., Nguyen, T.D., Kawasaki, S., Le, S.Q., Suzuki, T., Yokosuka, O. (2007). Temporal Abstraction and Data Mining with Visualization of Laboratory Data, Studies in Health Technology and Informatics ;129

13. Le, S.Q, Ho, T.B, Le, S.V (2006), Association-Based Dissimilarity Measures for Categorical Data: Limitation and Improvement, Advances in Knowledge Discovery and Data Mining, LNAI. 3918, 493-498.

14. Le S.Q. and Ho, T.B (2005). An Association-based Dissimilarity Measure for Categorical Data, Pattern Recognition Letters, Vol. 26, Issue 16 (2005).

15. Ho, T.B., Le, S.Q., Nguyen, C.H., Kawasaki, S., Yokoi, H. and Takabayashi, K. (2004). Temporal Logic in Mining Hepatitis Data, Japan-Vietnam Joint Workshop on Active Mining , Hanoi, Vietnam, pp. 55-60.

16. Le, S.Q., Ho, T.B. and Phan, T.T.H (2004). A novel graph-based similarity measure for 2D chemical structures, Genome Informatics, Vol. 14, No. 2, pp. 82-91.

17. Takabayashi, K., Yokoi, H., Ho, T.B., Nguyen, T.D., Kawasaki, S., Le, S.Q., Yokosuka, O., Imazeki, O., Satomura, Y. (2004). Data Mining of Viral Hepatitis with Temporal Abstraction, MedInfo 2004 , 7-11 September, San Fransisco.

18. Le, S.Q. and Ho, T.B. (2004). Measuring the Similarity for Heterogeneous Data: An Ordered Probability-Based Approach, Discovery Science, LNAI 3245 , Springer, pp. 129-141.

19. Le, S.Q. and Ho, T.B. (2004). Conditional Probability Distribution-based Dissimilarity Measure for Categorical Data, Advanced Knowledge Discovery and Data Mining, LNAI 3056 , Springer, pp. 580-589

20. Ho, T.B., Nguyen, T.D., Kawasaki, S. and Le, S.Q. (2004). Combining Temporal Abstraction and Data Mining Methods in Medical Data Mining. Chapter 7, Intelligent Knowledge-Based Systems, Vol. 3, T. Leondes (Ed.), Kluwer Academic Press, pp. 198-222.

21. Ho, T.B., Nguyen, T.D., Kawasaki, S., Le, S.Q., Nguyen, D.D., Yokoi, H. and Takabayashi, K. (2003). Mining Hepatitis Data with Temporal Abstraction, the 9th ACM International Conference on Knowledge Discovery and Data Mining (KDD-03) , pp. 369-377.

22. Le, S.Q. and Ho, T.B. (2003). A k-sets Clustering Algorithm for Categorical and Mixed Data, SANKEN International Symposium on New Trends in Knowledge Processing , Osaka, March 10-11, pp. 124-128

23. Le S.Q., Huynh T. T. B. and Luong C. M (2003). A Multilayer Algorithm for Discovering Clusters in Large Spatial Databases and Its Application, Asian Journal of Geoinformatics, Vol. 3, Number 3.