1: Pinto D, Pagnamenta AT, Klei L, Anney R, Merico D, Regan R, Conroy J,
Magalhaes TR, Correia C, Abrahams BS, Almeida J, Bacchelli E, Bader GD, Bailey
AJ, Baird G, Battaglia A, Berney T, Bolshakova N, Bolte S, Bolton PF, Bourgeron
T, Brennan S, Brian J, Bryson SE, Carson AR, Casallo G, Casey J, Chung BH,
Cochrane L, Corsello C, Crawford EL, Crossett A, Cytrynbaum C, Dawson G, de Jonge
M, Delorme R, Drmic I, Duketis E, Duque F, Estes A, Farrar P, Fernandez BA,
Folstein SE, Fombonne E, Freitag CM, Gilbert J, Gillberg C, Glessner JT, Goldberg
J, Green A, Green J, Guter SJ, Hakonarson H, Heron EA, Hill M, Holt R, Howe JL,
Hughes G, Hus V, Igliozzi R, Kim C, Klauck SM, Kolevzon A, Korvatska O,
Kustanovich V, Lajonchere CM, Lamb JA, Laskawiec M, Leboyer M, Le Couteur A,
Leventhal BL, Lionel AC, Liu XQ, Lord C, Lotspeich L, Lund SC, Maestrini E,
Mahoney W, Mantoulan C, Marshall CR, McConachie H, McDougle CJ, McGrath J,
McMahon WM, Merikangas A, Migita O, Minshew NJ, Mirza GK, Munson J, Nelson SF,
Noakes C, Noor A, Nygren G, Oliveira G, Papanikolaou K, Parr JR, Parrini B, Paton
T, Pickles A, Pilorge M, Piven J, Ponting CP, Posey DJ, Poustka A, Poustka F,
Prasad A, Ragoussis J, Renshaw K, Rickaby J, Roberts W, Roeder K, Roge B, Rutter
ML, Bierut LJ, Rice JP, Salt J, Sansom K, Sato D, Segurado R, Sequeira AF, Senman
L, Shah N, Sheffield VC, Soorya L, Sousa I, Stein O, Sykes N, Stoppioni V,
Strawbridge C, Tancredi R, Tansey K, Thiruvahindrapduram B, Thompson AP, Thomson
S, Tryfon A, Tsiantis J, Van Engeland H, Vincent JB, Volkmar F, Wallace S, Wang
K, Wang Z, Wassink TH, Webber C, Weksberg R, Wing K, Wittemeyer K, Wood S, Wu J,
Yaspan BL, Zurawiecki D, Zwaigenbaum L, Buxbaum JD, Cantor RM, Cook EH, Coon H,
Cuccaro ML, Devlin B, Ennis S, Gallagher L, Geschwind DH, Gill M, Haines JL,
Hallmayer J, Miller J, Monaco AP, Nurnberger Jr JI, Paterson AD, Pericak-Vance
MA, Schellenberg GD, Szatmari P, Vicente AM, Vieland VJ, Wijsman EM, Scherer SW,
Sutcliffe JS, Betancur C. Functional impact of global rare copy number variation
in autism spectrum disorders. Nature. 2010 Jun 9. [Epub ahead of print] PubMed
[PMID: 20531469]

2: Rzymski T, Milani M, Pike L, Buffa F, Mellor HR, Winchester L, Pires I,
Hammond E, Ragoussis I, Harris AL. Regulation of autophagy by ATF4 in response to
severe hypoxia. Oncogene. 2010 May 31. [Epub ahead of print] PubMed [PMID:
20514020]

3: De Santa F, Barozzi I, Mietton F, Ghisletti S, Polletti S, Tusi BK, Muller H,
Ragoussis J, Wei CL, Natoli G. A large fraction of extragenic RNA pol II
transcription sites overlap enhancers. PLoS Biol. 2010 May 11;8(5):e1000384.
PubMed [PMID: 20485488]

4: Grzmil M, Rzymski T, Milani M, Harris AL, Capper RG, Saunders NJ, Salhan A,
Ragoussis J, Norbury CJ. An oncogenic role of eIF3e/INT6 in human breast cancer.
Oncogene. 2010 May 10. [Epub ahead of print] PubMed [PMID: 20453879]

5: Favaro E, Ramachandran A, McCormick R, Gee H, Blancher C, Crosby M, Devlin C,
Blick C, Buffa F, Li JL, Vojnovic B, Pires das Neves R, Glazer P, Iborra F, Ivan
M, Ragoussis J, Harris AL. MicroRNA-210 regulates mitochondrial free radical
response to hypoxia and krebs cycle in cancer cells by targeting iron sulfur
cluster protein ISCU. PLoS One. 2010 Apr 26;5(4):e10345. PubMed [PMID: 20436681]

6: Pagnamenta AT, Bacchelli E, de Jonge MV, Mirza G, Scerri TS, Minopoli F,
Chiocchetti A, Ludwig KU, Hoffmann P, Paracchini S, Lowy E, Harold DH, Chapman
JA, Klauck SM, Poustka F, Houben RH, Staal WG, Ophoff RA, O'Donovan MC, Williams
J, Nothen MM, Schulte-Korne G, Deloukas P, Ragoussis J, Bailey AJ, Maestrini E,
Monaco AP; International Molecular Genetic Study Of Autism Consortium.
Characterization of a Family with Rare Deletions in CNTNAP5 and DOCK4 Suggests
Novel Risk Loci for Autism and Dyslexia. Biol Psychiatry. 2010 Mar 24. [Epub
ahead of print] PubMed [PMID: 20346443]

7: Ghisletti S, Barozzi I, Mietton F, Polletti S, De Santa F, Venturini E,
Gregory L, Lonie L, Chew A, Wei CL, Ragoussis J, Natoli G. Identification and
characterization of enhancers controlling the inflammatory gene expression
program in macrophages. Immunity. 2010 Mar 26;32(3):317-28. Epub 2010 Mar 4.
PubMed [PMID: 20206554]

8: Gee HE, Camps C, Buffa FM, Patiar S, Winter SC, Betts G, Homer J, Corbridge R,
Cox G, West CM, Ragoussis J, Harris AL. hsa-mir-210 is a marker of tumor hypoxia
and a prognostic factor in head and neck cancer. Cancer. 2010 May
1;116(9):2148-58. PubMed [PMID: 20187102]

9: Van Es MA, Van Vught PW, Veldink JH, Andersen PM, Birve A, Lemmens R, Cronin
S, Van Der Kooi AJ, De Visser M, Schelhaas HJ, Hardiman O, Ragoussis I,
Lambrechts D, Robberecht W, Wokke JH, Ophoff RA, Van Den Berg LH. Analysis of
FGGY as a risk factor for sporadic amyotrophic lateral sclerosis. Amyotroph
Lateral Scler. 2009 Oct-Dec;10(5-6):441-7. PubMed [PMID: 19922138]

10: Koukourakis MI, Giatromanolaki A, Sheldon H, Buffa FM, Kouklakis G, Ragoussis
I, Sivridis E, Harris AL; Tumour and Angiogenesis Research Group. Phase I/II
trial of bevacizumab and radiotherapy for locally advanced inoperable colorectal
cancer: vasculature-independent radiosensitizing effect of bevacizumab. Clin
Cancer Res. 2009 Nov 15;15(22):7069-76. Epub 2009 Nov 3. PubMed [PMID: 19887481]

11: Butler HT, Warden DR, Hogervorst E, Ragoussis J, Smith AD, Lehmann DJ.
Association of the aromatase gene with Alzheimer's disease in women. Neurosci
Lett. 2010 Jan 14;468(3):202-6. Epub 2009 Oct 30. PubMed [PMID: 19879925]

12: Tinline-Purvis H, Savory AP, Cullen JK, Dave A, Moss J, Bridge WL, Marguerat
S, Bahler J, Ragoussis J, Mott R, Walker CA, Humphrey TC. Failed gene conversion
leads to extensive end processing and chromosomal rearrangements in fission
yeast. EMBO J. 2009 Nov 4;28(21):3400-12. Epub 2009 Oct 1. PubMed [PMID: 19798055]

13: Winchester L, Yau C, Ragoussis J. Comparing CNV detection methods for SNP
arrays. Brief Funct Genomic Proteomic. 2009 Sep;8(5):353-66. Epub 2009 Sep 8.
Review. PubMed [PMID: 19737800]

14: Iseri SU, Osborne RJ, Farrall M, Wyatt AW, Mirza G, Nurnberg G, Kluck C,
Herbert H, Martin A, Hussain MS, Collin JR, Lathrop M, Nurnberg P, Ragoussis J,
Ragge NK. Seeing clearly: the dominant and recessive nature of FOXE3 in eye
developmental anomalies. Hum Mutat. 2009 Oct;30(10):1378-86. PubMed [PMID:
19708017]

15: Herrera BM, Lockstone HE, Taylor JM, Wills QF, Kaisaki PJ, Barrett A, Camps
C, Fernandez C, Ragoussis J, Gauguier D, McCarthy MI, Lindgren CM. MicroRNA-125a
is over-expressed in insulin target tissues in a spontaneous rat model of Type 2
Diabetes. BMC Med Genomics. 2009 Aug 18;2:54. PubMed [PMID: 19689793]

16: Newbury DF, Winchester L, Addis L, Paracchini S, Buckingham LL, Clark A,
Cohen W, Cowie H, Dworzynski K, Everitt A, Goodyer IM, Hennessy E, Kindley AD,
Miller LL, Nasir J, O'Hare A, Shaw D, Simkin Z, Simonoff E, Slonims V, Watson J,
Ragoussis J, Fisher SE, Seckl JR, Helms PJ, Bolton PF, Pickles A, Conti-Ramsden
G, Baird G, Bishop DV, Monaco AP. CMIP and ATP2C2 modulate phonological
short-term memory in language impairment. Am J Hum Genet. 2009 Aug;85(2):264-72.
Epub 2009 Jul 30. PubMed [PMID: 19646677]

17: Kaur K, Ragge NK, Ragoussis J. Molecular analysis of FOXC1 in subjects
presenting with severe developmental eye anomalies. Mol Vis. 2009 Jul
13;15:1366-73. PubMed [PMID: 19626132]

18: Jallow M, Teo YY, Small KS, Rockett KA, Deloukas P, Clark TG, Kivinen K,
Bojang KA, Conway DJ, Pinder M, Sirugo G, Sisay-Joof F, Usen S, Auburn S,
Bumpstead SJ, Campino S, Coffey A, Dunham A, Fry AE, Green A, Gwilliam R, Hunt
SE, Inouye M, Jeffreys AE, Mendy A, Palotie A, Potter S, Ragoussis J, Rogers J,
Rowlands K, Somaskantharajah E, Whittaker P, Widden C, Donnelly P, Howie B,
Marchini J, Morris A, Sanjoaquin M, Achidi EA, Agbenyega T, Allen A, Amodu O,
Corran P, Djimde A, Dolo A, Doumbo OK, Drakeley C, Dunstan S, Evans J, Farrar J,
Fernando D, Hien TT, Horstmann RD, Ibrahim M, Karunaweera N, Kokwaro G, Koram KA,
Lemnge M, Makani J, Marsh K, Michon P, Modiano D, Molyneux ME, Mueller I, Parker
M, Peshu N, Plowe CV, Puijalon O, Reeder J, Reyburn H, Riley EM, Sakuntabhai A,
Singhasivanon P, Sirima S, Tall A, Taylor TE, Thera M, Troye-Blomberg M, Williams
TN, Wilson M, Kwiatkowski DP; Wellcome Trust Case Control Consortium; Malaria
Genomic Epidemiology Network. Genome-wide and fine-resolution association
analysis of malaria in West Africa. Nat Genet. 2009 May 24. [Epub ahead of print]
PubMed [PMID: 19465909]

19: Ragoussis J. Genotyping technologies for genetic research. Annu Rev Genomics
Hum Genet. 2009;10:117-33. Review. PubMed [PMID: 19453250]

20: Pilgaard L, Lund P, Duroux M, Lockstone H, Taylor J, Emmersen J, Fink T,
Ragoussis J, Zachar V. Transcriptional signature of human adipose tissue-derived
stem cells (hASCs) preconditioned for chondrogenesis in hypoxic conditions. Exp
Cell Res. 2009 Jul 1;315(11):1937-52. Epub 2009 Feb 2. PubMed [PMID: 19331821]

21: Wilder SP, Kaisaki PJ, Argoud K, Salhan A, Ragoussis J, Bihoreau MT, Gauguier
D. Comparative analysis of methods for gene transcription profiling data derived
from different microarray technologies in rat and mouse models of diabetes. BMC
Genomics. 2009 Feb 5;10:63. PubMed [PMID: 19196459]

22: Van Es MA, Van Vught PW, Veldink JH, Andersen PM, Birve A, Lemmens R, Cronin
S, Van Der Kooi AJ, Visser MD, Schelhaas HJ, Hardiman O, Ragoussis I, Lambrechts
D, Robberecht W, Wokke JH, Ophoff RA, Van Den Berg LH. Analysis of FGGY as a risk
factor for sporadic amyotrophic lateral sclerosis. Amyotroph Lateral Scler. 2009
Feb 19:1-7. [Epub ahead of print] PubMed [PMID: 19177248]

23: Malaria Genomic Epidemiology Network. A global network for investigating the
genomic epidemiology of malaria. Nature. 2008 Dec 11;456(7223):732-7. PubMed
[PMID: 19079050]