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Sequence Alignment with monotonic gap penalties   |
INSTALLATIONA compressed tarred source distribution is available for download here. Alternatively, you can download precompiled binaries for Linux, SGI IRIX64, SunOS, OSF, Linux Alpha (thanks to Dr Frank Eisenhaber). To compile the sources, after untarring the distribution ariadne-1.3.tar.Z type the following commands
% cd ./SRC-1.3/
% make
The binaries will be in the directory ./SRC-1.3/$UNAME
where $UNAME is the machine architecture returned by the uname
command. Either put this directory on your path or copy the binaries
to a directory in your path.
cc -o ./ariadne -O -I./Include cl.c gaplib.c profile_util.c prospero_utils.c \\
searchpath.c cmp.c profile_stat.c ariadne.c readline.c seq_util.c -lm
cc -o ./prospero -O -I./Include cl.c gaplib.c profile_util.c prospero_utils.c \\
searchpath.c cmp.c profile_stat.c prospero.c readline.c seq_util.c -lm
This will leave the executables in the source directory; they will need to be moved elsewhere by hand. |
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