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INTRAPID: A tool for genome wide analysis of interaction between SNPs.This software is still under development, but a non-beta version should be released very soon.Download latest version: ( Please note that the GSL libraries will need to be installed before compiling the codes )IntrapidThe above link lets you download a 'tar.gz' format file, which needs to be unzipped by using a command, tar zxfv file_name ( tar zxfv intrapid-0.3.tar.gz in this case)Once unpacked, change over to the "Intrapid" directory, cd intrapid-0.3 At this stage you would need to configure "Intrapid" as per your system configuration. Use the following command for this, configure A simple " make" command at this stage should compile "Intrapid" for your system.You should now have the following programs available in the your directory, Binary Trait (Case Control Design):CCIntrapid1block, CCIntrapid2block ( Statically compiled version ) Continuous Trait (Quantitative Trait) : QTIntrapid1block, QTIntrapid2block ( Statically compiled version ) Download sample files:Binary Trait (Case Control Design): Download File format Conversion scripts: From SNP test to Intrapid: SNPtest2Intrapid From PLINK to Intrapid: plink2Intrapid Older versions:
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